BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031B10SP1|AL429347
(1001 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1180 1308 0.0
>3x_Contig1180
Length = 4625
Score = 1308 bits (653), Expect = 0.0
Identities = 680/695 (97%), Gaps = 1/695 (0%)
Strand = Plus / Minus
Query: 1 ggtggatggggccttgatatcgtaccattcctttctggtgaatgggtcgacaactctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 ggtggatggggccttgatatcgtaccattcctttctggtgaatgggtcgacaactctctt 647
Query: 61 cttcaaacccttcttacccttggacaatctcttgttcttaccaacagccatcttgaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 cttcaaacccttcttacccttggacaatctcttgttcttaccaacagccatcttgaataa 587
Query: 121 atgtttatggtacttttctggttgatctgcttactttcgatagaaccaaaggaaatgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 atgtttatggtacttttctggttgatctgcttactttcgatagaaccaaaggaaatgatt 527
Query: 181 acactaacaaaatataactgtatcaaataamatagctgttacaataactatccagtatca 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 526 acactaacaaaatataactgtatcaaataaaatagctgttacaataactatccagtatca 467
Query: 241 aaatcttataamttattctcttcctgcaatacaaaattcatatttcttcaactgttacta 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 aaatcttataaattattctcttcctgcaatacaaaattcatatttcttcaactgttacta 407
Query: 301 tttcgataattcamaattcaatataattgtcaatcgtcattgavaaatgggactcgatat 360
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 406 tttcgataattcaaaattcaatataattgtcaatcgtcattgaaaaatgggactcgatat 347
Query: 361 taggaggragacaccacagcgaatgavgcgcaa-svggcgaaacgatggggcgggtggta 419
||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 346 taggaggaagacaccacagcgaatgaagcgcaagcaggcgaaacgatggggcgggtggta 287
Query: 420 cggaccggtgtgagasagactgtsggcggaatgccaatgggagatgctaatgggaatggt 479
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 286 cggaccggtgtgagaaagactgtaggcggaatgccaatgggagatgctaatgggaatggt 227
Query: 480 gtagtgavgggaggggaaagggagttacagtcagccagtggaggctgggaagagattcct 539
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gtagtgaagggaggggaaagggagttacagtcagccagtggaggctgggaagagattcct 167
Query: 540 actgtggagcgttctgtcgagctaggccaggmattcctgccctctcagcctagagattga 599
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 166 actgtggagcgttctgtcgagctaggccaggaattcctgccctctcagcctagagattga 107
Query: 600 gcctaatttttcgtgttaggctcacccggtcacatgacagcagtwaacaaagttcctatt 659
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 106 gcctaatttttcgtgttaggctcacccggtcacatgacagcagtaaacaaagttcctatt 47
Query: 660 tagcaaaatatcttactgttatgaaatttgaagat 694
|||||||| ||||||||||||||||||||||||||
Sbjct: 46 tagcaaaagatcttactgttatgaaatttgaagat 12
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7645
Number of Sequences: 1807
Number of extensions: 7645
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 1001
length of database: 10,358,551
effective HSP length: 16
effective length of query: 985
effective length of database: 10,329,639
effective search space: 10174694415
effective search space used: 10174694415
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)